Track Descriptions & Citations

Tracks Built into this Server

WS190 Gene models
This track displays the WS190 Gene Model from WormBase

lincRNAs
This track displays WS250 lincRNAs

3'UTRome V1.0 (mixed tissues)
This track displays our latest 3'UTR dataset

3'UTRs from Jan et al., 2010 (mixed tissues/stages)
3'UTRs from Jan et al., 2011 (mixed tissues/stages)

ALG-1 binding sites from Zisoulis et al., 2010
No additional information available.

Protein Domains
No additional information available.

DNA/GC_Content
No additional information available.

Multi-Z alignmddent 6 species
No additional information available.

Intestine transcriptome (ges-1)
No additional information available.

Intestine polyA sites (ges-1)
No additional information available.

pharynx polyA sites (myo-2)
No additional information available.

body muscle polyA sites (myo-3)
No additional information available.

Pharynx transcriptome (myo-2)
No additional information available.

Body muscle (myo-3)
No additional information available.

Intestine Mapped PolyA (ges-1)
No additional information available.

Pharynx Mapped PolyA (myo-2)
No additional information available.

Body muscle Mapped PolyA (myo-3)
No additional information available.

Mixed-stages Transcriptome (+ Strand)
No additional information available.

Mixed-stages Transcriptome (- Strand)
No additional information available.

TargetSCAN New miRNA Targets Predictions
miRNA Target Predictions in 3'UTRome 1.0 (Caesar)

Conserved elements not explanable as miRNA seeds
No additional information available.

New PicTar miRNA binding sites, 3 species
miRNA Target Predictions in 3'UTRome 1.0 (Caesar)

New PicTar miRNA binding sites, 5 species
New PicTar miRNA Target Predictions 5 Species.

Operons
These are operons published by Blumenthal et al, Nature 417: 851-

 

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