Track Descriptions & Citations

Tracks Built into this Server

WS250 Gene model
This track displays the WS250 Gene Model from WormBase

lincRNAs
This track displays the WS250 Gene Model from WormBase

Arcade cells,intestinal valve Transcriptome (bath-15)
No additional information available.

Arcade cells,intestinal valve PAS sites (bath-15)
No additional information available.

GABAergic neurons transcriptome (unc-47)
No additional information available.

GABAergic neurons PAS sites (unc-47)
No additional information available.

Hypodermis transcriptome (dpy-7)
No additional information available.

Hypodermis PAS sites (dpy-7)
No additional information available.

NMDA neurons transcriptome (nmr-1)
No additional information available.

NMDA neurons PAS sites (nmr-1)
No additional information available.

Seam cells transcriptome (grd-10)
No additional information available.

Seam cells PAS sites (grd-10)
No additional information available.

Intestine transcriptome (ges-1)
No additional information available.

Intestine PAS sites (ges-1)
No additional information available.

Pharynx transcriptome (myo-2)
No additional information available.

Pharynx PAS sites (myo-2)
No additional information available.

Body muscle PAS sites (myo-3)
No additional information available.

Body muscle PAS sites (myo-3)
No additional information available.

Arcade cells,intestinal valve 3'UTRs (bath-15)
No additional information available.

Seam cells 3'UTRs (grd-10)
No additional information available.

NMDA neurons 3'UTRs (nmr-1)
No additional information available.

GABAergic neurons 3'UTRs (unc-47)
No additional information available.

Intestine 3'UTRs (ges-1)
No additional information available.

Pharynx muscle 3'UTRs (myo-2)
No additional information available.

Body muscle 3'UTRs (myo-3)
No additional information available.

Hypodermis 3'UTRs (dpy-7)
No additional information available.

Multi-Z alignment 6 species
No additional information available.

DNA/GC_Content
No additional information available.

3'UTRs from Mangone et al., 2011 remapped to WS250
3'UTRs from Mangone et al., 2011

3'UTRs from Jan et al., 2010 remapped to WS250 (mixed tissues/stages)
3'UTRs from Jan et al., 2011 (mixed tissues/stages)

Operons
These are operons published by Blumenthal et al, Nature 417: 851-

Worm UTRome V2 (filtered)
No additional information available.

Worm UTRome V2 (raw)
No additional information available.

miRanda and PicTar prediction (WS250)
No additional information available.

 

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